diff --git a/core/state/statedb.go b/core/state/statedb.go
index 769c8504c2..5d3db16014 100644
--- a/core/state/statedb.go
+++ b/core/state/statedb.go
@@ -129,6 +129,8 @@ type StateDB struct {
 
 	// Transient storage
 	transientStorage transientStorage
+	// Overrides to apply after Prepare()
+	pendingTransientOverrides map[common.Address]map[common.Hash]common.Hash
 
 	// Journal of state modifications. This is the backbone of
 	// Snapshot and RevertToSnapshot.
@@ -1465,6 +1467,22 @@ func (s *StateDB) Prepare(rules params.Rules, sender, coinbase common.Address, d
 	}
 	// Reset transient storage at the beginning of transaction execution
 	s.transientStorage = newTransientStorage()
+
+	// Apply any pending transient storage overrides after reset
+	if s.pendingTransientOverrides != nil {
+		for addr, storage := range s.pendingTransientOverrides {
+			for key, value := range storage {
+				s.transientStorage.Set(addr, key, value)
+			}
+		}
+		s.pendingTransientOverrides = nil // Clear after applying
+	}
+}
+
+// SetPendingTransientOverrides stores transient storage overrides to be applied
+// after the next Prepare() call. This ensures overrides are applied to a clean state.
+func (s *StateDB) SetPendingTransientOverrides(overrides map[common.Address]map[common.Hash]common.Hash) {
+	s.pendingTransientOverrides = overrides
 }
 
 // AddAddressToAccessList adds the given address to the access list
diff --git a/internal/ethapi/api_test.go b/internal/ethapi/api_test.go
index f88923dbf3..1f39d4047b 100644
--- a/internal/ethapi/api_test.go
+++ b/internal/ethapi/api_test.go
@@ -1301,8 +1301,8 @@ func TestCall(t *testing.T) {
 			},
 			overrides: override.StateOverride{
 				randomAccounts[2].addr: override.OverrideAccount{
-					// PUSH1 0x01 PUSH1 0x00 TSTORE PUSH1 0x00 TLOAD PUSH1 0x00 MSTORE PUSH1 0x20 PUSH1 0x00 RETURN
-					Code: hex2Bytes("0x600160005d60005c60005260206000f3"),
+					// PUSH1 0x00 TLOAD PUSH1 0x00 MSTORE PUSH1 0x20 PUSH1 0x00 RETURN
+					Code: hex2Bytes("0x60005c60005260206000f3"),
 					TransientStorage: map[common.Hash]common.Hash{
 						common.Hash{}: common.HexToHash("0xabcd"),
 					},
diff --git a/internal/ethapi/override/override.go b/internal/ethapi/override/override.go
index 47d01d7259..21f30f540e 100644
--- a/internal/ethapi/override/override.go
+++ b/internal/ethapi/override/override.go
@@ -61,6 +61,19 @@ func (diff *StateOverride) Apply(statedb *state.StateDB, precompiles vm.Precompi
 	if diff == nil {
 		return nil
 	}
+	// Get transient storage overrides to apply after Prepare()
+	transientOverrides := make(map[common.Address]map[common.Hash]common.Hash)
+	for addr, account := range *diff {
+		if account.TransientStorage != nil && len(account.TransientStorage) > 0 {
+			transientOverrides[addr] = account.TransientStorage
+		}
+	}
+
+	// Store transient storage overrides
+	if len(transientOverrides) > 0 {
+		statedb.SetPendingTransientOverrides(transientOverrides)
+	}
+
 	// Iterate in deterministic order so error messages and behavior are stable (e.g. for tests).
 	addrs := slices.SortedFunc(maps.Keys(*diff), common.Address.Cmp)
 
@@ -118,12 +131,6 @@ func (diff *StateOverride) Apply(statedb *state.StateDB, precompiles vm.Precompi
 				statedb.SetState(addr, key, value)
 			}
 		}
-		// Apply transient storage overrides.
-		if account.TransientStorage != nil {
-			for key, value := range account.TransientStorage {
-				statedb.SetTransientState(addr, key, value)
-			}
-		}
 	}
 	// Now finalize the changes. Finalize is normally performed between transactions.
 	// By using finalize, the overrides are semantically behaving as